manual:aube
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manual:aube [2016/06/16 17:01] – created zenke | manual:aube [2017/04/18 16:22] (current) – [Extracting spikes from a single spk file.] zenke | ||
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====== Auryn Binary Extract (aube) ====== | ====== Auryn Binary Extract (aube) ====== | ||
- | This command line tool extracts spike information from [[spk|binary spike raster files]] and converts them in the more digestible [[ras]] format. Binary files provide a significant simulation speed advantage over the old [[ras]] file format and allow random access to spike information. '' | + | This command line tool extracts spike information from [[spk|binary spike raster files]] and converts them in the more digestible [[ras]] format. Binary files provide a significant simulation speed advantage over the old [[ras]] file format, take less disk space and allow random access to temporal chunks of spike information. '' |
- | + | ||
===== Compiling/ | ===== Compiling/ | ||
'' | '' | ||
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===== Usage examples ===== | ===== Usage examples ===== | ||
- | To see how this works let's consider an example. Let's first generate some spiking output using the Vogels Abbott benchmark network | + | To see how this works let's consider an example. Let's first generate some spiking output using the Vogels Abbott benchmark network |
To that end, we use example program '' | To that end, we use example program '' | ||
< | < | ||
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aube --input / | aube --input / | ||
</ | </ | ||
+ | or, alternatively, | ||
+ | < | ||
+ | aube -i / | ||
+ | </ | ||
+ | |||
If you want to write the output to a file instead you can call: | If you want to write the output to a file instead you can call: | ||
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mpirun -n 2 sim_coba_binmon --dir /tmp | mpirun -n 2 sim_coba_binmon --dir /tmp | ||
</ | </ | ||
- | This will run the same simulation | + | This will run the Vogels Abbott benchmark |
Just call aube on all the input files: | Just call aube on all the input files: |
manual/aube.1466096468.txt.gz · Last modified: 2016/06/16 17:01 by zenke